Protein ZmOrphan28
ZmOrphan28 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan28
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B6SV94
Subgenome: 2

Protein ZmOrphan28

ZmOrphan28 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF06203
Zm00001eb208040_T005
Zm00001eb208040_T001
Zm00001eb208040_T002
Zm00001eb208040_T003
Zm00001eb208040_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d053880DAPseq no logo sequence fimo position
Zm00001d053880DAPseq no logo sequence fimo position
Zm00001d053880ChIPseq no logo sequence fimo position
Zm00001d053880PChIPseq no logo sequence fimo position

Interactions where ZmOrphan28 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan28 is the target  
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There are 156 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb208040_T005 from maize genome v5

Amino Acid Sequence
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MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARSDDSILSSSGIHPYL
RRLMVVGLAGRFELGLGSQHGARPSLNRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKK
SKKKKVVKAMAKGNEELLPNAKCKEEEADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSG
PELPTSAAEVRAKLADIDLFPENGAGGGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQA
LEEET

MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARSDDSILSSSGIHPYL
RRLMVVGLAGRFELGLGSQHGARPSLNRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKK
SKKKKVVKAMAKGNEELLPNAKCKEEEADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSG
PELPTSAAEVRAKLADIDLFPENGAGGGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQA
LEEET

MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARSDDSILSSSGIHPYL
RRLMVVGLAGRFELGLGSQHGARPSLNRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKK
SKKKKVVKAMAKGNEELLPNAKCKEEEADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSG
PELPTSAAEVRAKLADIDLFPENGAGGGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQA
LEEET

MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARSDDSILSSSGIHPYL
RRLMVVGLAGRFELGLGSQHGARPSLNRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKK
SKKKKVVKAMAKGNEELLPNAKCKEEEADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSG
PELPTSAAEVRAKLADIDLFPENGAGGGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQA
LEEET

MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARSDDSILSSSGIHPYL
RRLMVVGLAGRFELGLGSQHGARPSLNRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKK
SKKKKVVKAMAKGNEELLPNAKCKEEEADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSG
PELPTSAAEVRAKLADIDLFPENGAGGGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQA
LEEET

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF06203
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Nucleotide Sequence
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GAACCCTTTCTTCCTCTTCCTCCCC...

GRMZM2G155370_T01 from maize genome v3


Related TFome: pUT6504

Amino Acid Sequence
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MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARSDDSILSSSGIHPYL
RRLMVVGLAGRFELGLGSQHGARPSLNRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKK
SKKKKVVKAMAKGNEELLPNAKCKEEEADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSG
PELPTSAAEVRAKLADIDLFPENGAGGGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQA
LEEET

Nucleotide Sequence
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GAACCCTTTCTTCCTCTTCCTCCCC...

Zm00001d053880_T001 from maize genome v4

Amino Acid Sequence
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MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARSDDSILSSSGIHPYL
RRLMVVGLAGRFELGLGSQHGARPSLNRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKK
SKKKKVVKAMAKGNEELLPNAKCKEEEADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSG
PELPTSAAEVRAKLADIDLFPENGAGGGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKASTRTD

Nucleotide Sequence
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ATGTCGTCTTCCTGCATACCGACCG...

Zm00001eb208040_T001 from maize genome v5

Amino Acid Sequence
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MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARFELGLGSQHGARPSL
NRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKKSKKKKVVKAMAKGNEELLPNAKCKEE
EADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSGPELPTSAAEVRAKLADIDLFPENGAG
GGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQALEEET

Nucleotide Sequence
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CAAATAATACATCATCTCAACAGTT...

Zm00001eb208040_T002 from maize genome v5

Amino Acid Sequence
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MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARFELGLGSQHGARPSL
NRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKKSKKKKVVKAMAKGNEELLPNAKCKEE
EADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSGPELPTSAAEVRAKLADIDLFPENGAG
GGGVREASVLRYKEKRRTRLFSKKIRYQVRKGRFVRSPSLLRQALEEET

Nucleotide Sequence
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GTTTGGTGTACTGTTTGATATTTTT...

Zm00001eb208040_T003 from maize genome v5

Amino Acid Sequence
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MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARFELGLGSQHGARPSL
NRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKKSKKKKVVKAMAKGNEELLPNAKCKEE
EADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSGPELPTSAAEVRAKLADIDLFPENGAG
GGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADCRPRMKGRFVRSPSLLRQALEEET

Nucleotide Sequence
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GTTTGGTGTACTGTTTGATATTTTT...

Zm00001eb208040_T004 from maize genome v5

Amino Acid Sequence
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MSSSCIPTGLRLDLDMVKAAASPVGAHSSPLRPAHYSSPSSTLSSEASNASSSSATSVSLKRARAPRKRPNQAYNEAAAL
LASIHPSVFPVNKSPKTAPPRPPQLSVLAAALDASPDLLPPLPVLADSAFLLRDQDTPSPKPRSPSGAKNCPSPAPVSSA
FRDFRDPPSSASLDAVGADELGEIDFDDDGFNADSILDVGDAAAGGLDGIMGSLTVDVESGTAARFELGLGSQHGARPSL
NRALKRRDDDGAWWMWPAVPVKDLTIAPPAPPAPPAPNAAVPQAAAAAAPEKKKSKKKKVVKAMAKGNEELLPNAKCKEE
EADASVDDAAANGDGDSDSAPTNAPKAGLGLKLDADEVLKAWSDKGSMFAEGSGPELPTSAAEVRAKLADIDLFPENGAG
GGGVREASVLRYKEKRRTRLFSKKIRYQGRFVRSPSLLRQALEEET

Nucleotide Sequence
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GTTTGGTGTACTGTTTGATATTTTT...


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